
Artificial tracing to determine water transfer times from the surface to the Verneau spring (2020)
© BRGM
Challenges and needs
The deterioration in river water quality in Franche-Comté over the last few decades is due in particular to excess nutrients resulting from past and ongoing human activity. In the Jura Mountains, the impact of agricultural practices and domestic and industrial waste disposal is compounded by the vulnerability of karst landscapes where water infiltrates easily, while limiting filtration processes at ground level.
International scientific work on what happens to pollutants in the environment is very poorly documented for karstic environments and few references are available on the environmental impact of human activities in Franche-Comté.
Reducing the exposure of the population and, more generally, the environment, to diffuse pollution involves taking into account the combined effects of human activities and climate change on water resources. To tackle the problem of water contamination by nutrients, we need to know more about the following:
- changes in the quantity and quality of water resources, taking account of hydro-climatic changes, land use and nitrogen and phosphorus discharges;
- the hydrogeological functioning of karst aquifers and exchanges between karst formations and rivers;
- nutrient transfers from the soil to the subsurface, springs and watercourses.
This subsequently involves adapting the area, with remedial measures to reduce agricultural, domestic or industrial discharges.
There are multiple operational benefits. The purpose is to identify areas that contribute to pollution, to determine how the input of nutrients into water can be limited and to guide the management and adaptation of the area.
Work programme
The NUTRI-Karst project is divided into four tasks:
Task 1: Studying the response of agro-hydro-systems in the Jura mountains to climate change and human activities
The aim is to assess the effects of climate change on water quality in Comtois rivers throughout the Jura massif, by tracing changes over the last 50 years in various climatic, agronomic, hydrological and physical-chemical variables.
Task 2: Karst-river exchanges and hydrogeological functioning of aquifers in the Loue basin
The aim is to gain a better understanding of the recharge of karst aquifers and surface/subsurface interactions, by applying a multi-disciplinary approach (gauging & longitudinal profiles, artificial tracing, hydrogeochemistry) to the Loue basin, leading to a 3D hydrogeological model and the delimitation of zones contributing to river flow.
Task 3: Nutrient transfers in karst hydrosystems in the Loue basin
The aim is to gain a better understanding of the impact of agricultural practices and, more broadly, human activities on water quality in soils, in springs and rivers. The expected results should reveal which agricultural practices are at risk of excess nutrients in water. A proposal for action to reduce river contamination will be presented.
Task 4: Contributing knowledge to build a shared vision of the causes of disruption to rivers in Franche-Comté
The purpose is to foster a dialogue between those working in the field and scientists in order to share layman's and technical knowledge. This is a prerequisite for discussing the remedial measures to be set up. This task is based on surveys and participatory multi-stakeholder workshops with a view to drawing up a collective roadmap. Knowledge will also be transferred to farmers alongside the promotion of project results in technical journals and communication through regional seminars.
The NUTRI-Karst project at a glance
- 6 years, end of programme in 2025
- Scientific production by agronomists, hydrogeologists, geochemists and technicians
- Methods used: data production (by monitoring physical and chemical, hydrogeological and agronomical parameters), development of hydrogeological approaches specifically for karst hydrosystems in cultivated areas (data analysis and modelling)
- A monitoring committee to bring together the various local stakeholders involved in the project, including local authorities (départements, public river basin bodies [EPTB], public water development and management bodies [EPAGE], river basin associations, regional nature parks [PNR], etc.), government departments (Departmental Territories Directorate [DDT], Regional Environment, Planning and Housing Directorate [DREAL], French Biodiversity Office [OFB], Regional Food, Agriculture and Forestry Directorate [DRAAF]), the farming and fishery sectors and civil society (Comté Interprofessional Management Committee [CIGC], fishing federations, etc.)
- Partners:
- BRGM (coordinator)
- Doubs - Belfort Region Interdepartmental Chamber of Agriculture
- Funding: out of the total funding of 1.3 million euros, 50% is provided by the Rhône-Méditerranée-Corse Water Agency, with the remainder contributed by the partners.

Sampling water for geochemical analysis to provide information on its origin and residence time in karstic aquifers (Sarrazine cave, 2021)
© BRGM